{
  "_id": "6a102889acfb0bcc41c90c26",
  "Package": "MM4LMM",
  "Type": "Package",
  "Title": "Inference of Linear Mixed Models Through MM Algorithm",
  "Version": "3.0.3",
  "Date": "2024-10-29",
  "Authors@R": "c(person(given = \"Fabien\",\nfamily = \"Laporte\",\nrole = c(\"aut\", \"cre\"),\nemail = \"fabien.laporte@outlook.com\"),\nperson(given = \"Tristan\",\nfamily = \"Mary-Huard\",\nrole = \"aut\"),\nperson(\"GQMS CoreFunctions Team\",\nrole = \"aut\"))",
  "Maintainer": "Fabien Laporte <fabien.laporte@outlook.com>",
  "Description": "The main function MMEst() performs (Restricted) Maximum\nLikelihood in a variance component mixed models using a Min-Max\n(MM) algorithm (Laporte, F., Charcosset, A. & Mary-Huard, T.\n(2022) <doi:10.1371/journal.pcbi.1009659>).",
  "License": "GPL (>= 2)",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-05-13 07:57:42 UTC",
    "User": "root"
  },
  "Author": "Fabien Laporte [aut, cre], Tristan Mary-Huard [aut], GQMS\nCoreFunctions Team [aut]",
  "Repository": "https://laportefab.r-universe.dev",
  "Date/Publication": "2024-10-30 10:20:02 UTC",
  "RemoteUrl": "https://github.com/cran/MM4LMM",
  "RemoteRef": "HEAD",
  "RemoteSha": "c3cbdd8bd54c19e52f19ffaa915f72725348c7ff",
  "MD5sum": "0553561f9f7bf81e94fad9562f263140",
  "_user": "laportefab",
  "_type": "src",
  "_file": "MM4LMM_3.0.3.tar.gz",
  "_fileid": "91d14f2c36fcc8c554363401e338a599a353ff3ec3251c1efc99696f032329b4",
  "_filesize": 714292,
  "_sha256": "91d14f2c36fcc8c554363401e338a599a353ff3ec3251c1efc99696f032329b4",
  "_created": "2026-05-13T07:57:42.000Z",
  "_published": "2026-05-22T09:57:29.707Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77357127841,
      "time": 180,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "6964651243"
    },
    {
      "job": 77357128169,
      "time": 163,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "6964648359"
    },
    {
      "job": 77357128020,
      "time": 177,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6964650345"
    },
    {
      "job": 77357128191,
      "time": 196,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6964656306"
    },
    {
      "job": 77357128251,
      "time": 256,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "6964664859"
    },
    {
      "job": 77357127961,
      "time": 332,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "6964692148"
    },
    {
      "job": 77357127849,
      "time": 230,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6964656618"
    },
    {
      "job": 77357127840,
      "time": 237,
      "config": "macos-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6964664189"
    },
    {
      "job": 77357127971,
      "time": 190,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6964593509"
    },
    {
      "job": 77357127612,
      "time": 112,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7157790364"
    },
    {
      "job": 77357127901,
      "time": 206,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "6964659847"
    },
    {
      "job": 77357128176,
      "time": 146,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "6964640531"
    },
    {
      "job": 77357127940,
      "time": 162,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6964645995"
    }
  ],
  "_buildurl": "https://github.com/r-universe/laportefab/actions/runs/25786053970",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/MM4LMM",
  "_commit": {
    "id": "c3cbdd8bd54c19e52f19ffaa915f72725348c7ff",
    "author": "Fabien Laporte <fabien.laporte@outlook.com>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 3.0.3\n",
    "time": 1730283602
  },
  "_maintainer": {
    "name": "Fabien Laporte",
    "email": "fabien.laporte@outlook.com",
    "login": "laportefab",
    "uuid": 58562454
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 2.10",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "RcppEigen",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "version": ">= 0.12.13",
      "role": "Imports"
    },
    {
      "package": "Matrix",
      "role": "Imports"
    },
    {
      "package": "parallel",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "MASS",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "purrr",
      "role": "Imports"
    },
    {
      "package": "corpcor",
      "role": "Imports"
    }
  ],
  "_owner": "cran",
  "_selfowned": true,
  "_usedby": 2,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "fabienlaporte",
      "count": 3,
      "uuid": 32843941
    },
    {
      "user": "laportefab",
      "count": 3,
      "uuid": 58562454
    }
  ],
  "_userbio": {
    "uuid": 58562454,
    "type": "user",
    "name": "LaporteFab"
  },
  "_downloads": {
    "count": 678,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/MM4LMM"
  },
  "_mentions": 1,
  "_searchresults": 18,
  "_topics": [
    "cpp"
  ],
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/MM4LMM.html",
    "manual.pdf"
  ],
  "_realowner": "laportefab",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.0.5",
      "date": "2018-05-31"
    },
    {
      "version": "1.1.4",
      "date": "2018-12-19"
    },
    {
      "version": "1.1.5",
      "date": "2019-01-15"
    },
    {
      "version": "2.0.1",
      "date": "2019-10-07"
    },
    {
      "version": "2.0.2",
      "date": "2020-03-03"
    },
    {
      "version": "2.1.0",
      "date": "2021-09-27"
    },
    {
      "version": "3.0.2",
      "date": "2022-07-11"
    },
    {
      "version": "3.0.3",
      "date": "2024-10-30"
    }
  ],
  "_exports": [
    "AnovaTest",
    "MMBlup",
    "MMEst",
    "MMVcov"
  ],
  "_datasets": [
    {
      "name": "QTLDetectionExample",
      "title": "QTL Detection Example",
      "object": "QTLDetectionExample",
      "file": "QTLDetectionExample.rda",
      "class": [
        "list"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "VarianceComponentExample",
      "title": "Variance Component Example",
      "object": "VarianceComponentExample",
      "file": "VarianceComponentExample.rda",
      "class": [
        "list"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "MM4LMM-package",
      "title": "Min-Max algorithms for Variance Component Mixed Model Inference.",
      "topics": [
        "MM4LMM-package",
        "MM4LMM"
      ]
    },
    {
      "page": "AnovaTest",
      "title": "Type I and Type III Tests for mixed models.",
      "topics": [
        "AnovaTest"
      ]
    },
    {
      "page": "MMBlup",
      "title": "BLUP from MM4LMM results",
      "topics": [
        "MMBlup"
      ]
    },
    {
      "page": "MMEst",
      "title": "MM inference method for variance component mixed models",
      "topics": [
        "MMEst"
      ]
    },
    {
      "page": "MMVcov",
      "title": "Covariance Matrix for variance estimators.",
      "topics": [
        "MMVcov"
      ]
    },
    {
      "page": "QTLDetectionExample",
      "title": "QTL Detection Example",
      "topics": [
        "QTLDetectionExample"
      ]
    },
    {
      "page": "VarianceComponentExample",
      "title": "Variance Component Example",
      "topics": [
        "VarianceComponentExample"
      ]
    }
  ],
  "_rundeps": [
    "cli",
    "corpcor",
    "dplyr",
    "generics",
    "glue",
    "lattice",
    "lifecycle",
    "magrittr",
    "MASS",
    "Matrix",
    "pillar",
    "pkgconfig",
    "purrr",
    "R6",
    "Rcpp",
    "RcppEigen",
    "rlang",
    "tibble",
    "tidyselect",
    "utf8",
    "vctrs",
    "withr"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_score": 2.03342375548695,
  "_indexed": true,
  "_nocasepkg": "mm4lmm",
  "_universes": [
    "laportefab"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "3.0.3",
      "date": "2026-05-13T08:00:25.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "c3cbdd8bd54c19e52f19ffaa915f72725348c7ff",
      "fileid": "97e7b8ea15b1c2ebddaa1c42aefe5d07e71a61915fced9224e7c9e316b3674a2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/laportefab/actions/runs/25786053970"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "3.0.3",
      "date": "2026-05-13T08:00:09.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "c3cbdd8bd54c19e52f19ffaa915f72725348c7ff",
      "fileid": "10981dfc26d6344191558b00f17f65f0c7d0c89214ecdba61accd4b9c86192c3",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/laportefab/actions/runs/25786053970"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "3.0.3",
      "date": "2026-05-13T08:00:25.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "c3cbdd8bd54c19e52f19ffaa915f72725348c7ff",
      "fileid": "22903f1175d77c4887b2bd89cb1d3ebce2b764999f8201abfafc8535e21e07e6",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/laportefab/actions/runs/25786053970"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "3.0.3",
      "date": "2026-05-13T08:00:39.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "c3cbdd8bd54c19e52f19ffaa915f72725348c7ff",
      "fileid": "7c079b09d0d2d8d7a1da9dd5615572b18df13fddaafcf707e254f32c305df531",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/laportefab/actions/runs/25786053970"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "3.0.3",
      "date": "2026-05-13T08:00:49.000Z",
      "arch": "aarch64",
      "commit": "c3cbdd8bd54c19e52f19ffaa915f72725348c7ff",
      "fileid": "94be2573af69545f710b68eb6d5cc7fe55cef8e9584a05691c7f0a39ed2708db",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/laportefab/actions/runs/25786053970"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "3.0.3",
      "date": "2026-05-13T08:01:56.000Z",
      "arch": "x86_64",
      "commit": "c3cbdd8bd54c19e52f19ffaa915f72725348c7ff",
      "fileid": "1d4a5ca08b5fee63f109b7d8ac204b3b5ffdf7fc49dcfa2f8a9fc2b645ea8beb",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/laportefab/actions/runs/25786053970"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "3.0.3",
      "date": "2026-05-13T08:00:31.000Z",
      "arch": "aarch64",
      "commit": "c3cbdd8bd54c19e52f19ffaa915f72725348c7ff",
      "fileid": "3bf24d1650b646068aacadd2d4afb9482bd45a22ab8ecf5ca49c0b297c6b3d07",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/laportefab/actions/runs/25786053970"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "3.0.3",
      "date": "2026-05-13T08:00:41.000Z",
      "arch": "x86_64",
      "commit": "c3cbdd8bd54c19e52f19ffaa915f72725348c7ff",
      "fileid": "e2390f2e19ebbb81433c4c63dc150e3a7542b36cac7e70c37b42f1a50e588650",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/laportefab/actions/runs/25786053970"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "3.0.3",
      "date": "2026-05-13T07:59:59.000Z",
      "arch": "x86_64",
      "commit": "c3cbdd8bd54c19e52f19ffaa915f72725348c7ff",
      "fileid": "57af7d7afe39fc9af7c4edd843b587fdb3d4138b7b7744a34176c576d041ea32",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/laportefab/actions/runs/25786053970"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "3.0.3",
      "date": "2026-05-13T07:59:16.000Z",
      "arch": "x86_64",
      "commit": "c3cbdd8bd54c19e52f19ffaa915f72725348c7ff",
      "fileid": "b46b0246e574d98acf9f3a9a6e59e96d75e1b53dd6451debe685d16b9712580c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/laportefab/actions/runs/25786053970"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "3.0.3",
      "date": "2026-05-13T07:59:21.000Z",
      "arch": "x86_64",
      "commit": "c3cbdd8bd54c19e52f19ffaa915f72725348c7ff",
      "fileid": "0a5530e28034d5afbc8f3441ceda764764d0a5a9fdf42e1a97b706f59cf35c4c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/laportefab/actions/runs/25786053970"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "3.0.3",
      "date": "2026-05-22T09:56:56.000Z",
      "arch": "emscripten",
      "commit": "c3cbdd8bd54c19e52f19ffaa915f72725348c7ff",
      "fileid": "69b43a52290f488d1cd0faaf109e389c29cfdc40333a28c307dca07cbc47c185",
      "status": "success",
      "buildurl": "https://github.com/r-universe/laportefab/actions/runs/25786053970"
    }
  ]
}